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| DOI | 10.1016/J.CMPB.2014.06.018 | ||||
| Año | 2014 | ||||
| Tipo | artículo de investigación |
Citas Totales
Autores Afiliación Chile
Instituciones Chile
% Participación
Internacional
Autores
Afiliación Extranjera
Instituciones
Extranjeras
Semen analysis is the first step in the evaluation of an infertile couple. Within this process, an accurate and objective morphological analysis becomes more critical as it is based on the correct detection and segmentation of human sperm components. In this paper, we present an improved two-stage framework for detection and segmentation of human sperm head characteristics (including acrosome and nucleus) that uses three different color spaces. The first stage detects regions of interest that define sperm heads, using k-means, then candidate heads are refined using mathematical morphology. In the second stage, we work on each region of interest to segment accurately the sperm head as well as nucleus and acrosome, using clustering and histogram statistical analysis techniques. Our proposal is also characterized by being fully automatic, where a user intervention is not required. Our experimental evaluation shows that our proposed method outperforms the state-of-the-art. This is supported by the results of different evaluation metrics. In addition, we propose a gold-standard built with the cooperation of a referent expert in the field, aiming to compare methods for detecting and segmenting sperm cells. Our results achieve notable improvement getting above 98% in the sperm head detection process at the expense of having significantly fewer false positives obtained by the state-of-the-art method. Our results also show an accurate head, acrosome and nucleus segmentation achieving over 80% overlapping against hand-segmented gold-standard. Our method achieves higher Dice coefficient, lower Hausdorff distance and less dispersion with respect to the results achieved by the state-of-the-art method. (C) 2014 Elsevier Ireland Ltd. All rights reserved.
| Ord. | Autor | Género | Institución - País |
|---|---|---|---|
| 1 | Chang, Violeta | Mujer |
Universidad de Chile - Chile
|
| 2 | SAAVEDRA-RONDO, JOSE MANUEL | Hombre |
Universidad de Chile - Chile
ORAND SA - Chile ORAND S.A. - Chile |
| 3 | CASTANEDA-ZEMAN, VICTOR ANTONIO | Hombre |
Universidad de Chile - Chile
|
| 4 | SARABIA-VILLAR, LUIS | Hombre |
Universidad de Chile - Chile
|
| 5 | HITSCHFELD-KAHLER, NANCY VIOLA | Mujer |
Universidad de Chile - Chile
|
| 6 | HAERTEL-GRUNDLER, STEFFEN | Hombre |
Universidad de Chile - Chile
|
| Fuente |
|---|
| FONDECYT |
| CONICYT |
| Fondef |
| Comisión Nacional de Investigación Científica y Tecnológica |
| Fondo de Fomento al Desarrollo Científico y Tecnológico |
| Comisión Nacional de Investigación CientÃfica y Tecnológica |
| Fondo Nacional de Desarrollo Científico, Tecnológico y de Innovación Tecnológica |
| Fondo Nacional de Desarrollo CientÃfico, Tecnológico y de Innovación Tecnológica |
| Fondo de Fomento al Desarrollo CientÃfico y Tecnológico |
| Biomedical Neuroscience Institute |
| Biomedical Neuroscience Institute (BNI) |
| U-Redes BioMedHPC |
| CONICYT (NAC-DoctoradoLatin) |
| CONICYT (NAC-ApoyoTesis) |
| Agradecimiento |
|---|
| The authors thank E. Labbe for support with the drawings of gold-standard. The authors thank A. Garcia for support with Fig. 1. Research in SCIAN-Lab (S. Hartel) is funded by FONDECYT (1120579), FONDEF (D11I1096), and the Biomedical Neuroscience Institute (BNI, ICM P09-015-F). SCIAN-Lab is a selected member of the German-Chilean Center of Excellence Initiative (DAAD). Violeta Chang was partially funded by CONICYT (NAC-DoctoradoLatin 57090057/NAC-ApoyoTesis 24100118) and she is partially funded by FONDECYT (1020579). Jose M. Saavedra is partially funded by CONICYT (PAI-78120425). Victor Castaneda is funded by FONDECYT (3140444) and U-Redes BioMedHPC. |
| The authors thank E. Labbe for support with the drawings of gold-standard. The authors thank A. Garcia for support with Fig. 1 . Research in SCIAN-Lab (S. Härtel) is funded by FONDECYT ( 1120579 ), FONDEF ( D11I1096 ), and the Biomedical Neuroscience Institute (BNI, ICM P09-015-F ). SCIAN-Lab is a selected member of the German-Chilean Center of Excellence Initiative (DAAD). Violeta Chang was partially funded by CONICYT (NAC-DoctoradoLatin 57090057/NAC-ApoyoTesis 24100118) and she is partially funded by FONDECYT (1020579). Jose M. Saavedra is partially funded by CONICYT ( PAI-78120425 ). Victor Castañeda is funded by FONDECYT (3140444) and U-Redes BioMedHPC. |