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Nuclear Functions of Nucleolin through Global Proteomics and Interactomic Approaches
Indexado
WoS WOS:000375891200025
Scopus SCOPUS_ID:84969172335
DOI 10.1021/ACS.JPROTEOME.6B00126
Año 2016
Tipo artículo de investigación

Citas Totales

Autores Afiliación Chile

Instituciones Chile

% Participación
Internacional

Autores
Afiliación Extranjera

Instituciones
Extranjeras


Abstract



Nucleolin (NCL) is a major component of the cell nucleolus, which has the ability to rapidly shuttle to several other cells' compartments. NCL plays important roles in a variety of essential functions, among which are ribosome biogenesis, gene expression, and cell growth. However, the precise mechanisms underlying NCL functions are still unclear. Our study aimed to provide new information on NCL functions via the identification of its nuclear interacting partners. Using an interactomics approach, we identified 140 proteins co-purified with NCL, among which 100 of them were specifically found to be associated with NCL after RNase digestion. The functional classification of these proteins confirmed the prominent role of NCL in ribosome biogenesis and additionally revealed the possible involvement of nuclear NCL in several pre-mRNA processing pathways through its interaction with RNA helicases and proteins participating in pre-mRNA splicing, transport, or stability. NCL knockdown experiments revealed that NCL regulates the localization of EXOSC10 and the amount of ZC3HAV1, two components of the RNA exosome, further suggesting its involvement in the control of mRNA stability. Altogether, this study describes the first nuclear interactome of human NCL and provides the basis for further understanding the mechanisms underlying the essential functions of this nucleolar protein.

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Disciplinas de Investigación



WOS
Biochemical Research Methods
Scopus
Sin Disciplinas
SciELO
Sin Disciplinas

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Publicaciones WoS (Ediciones: ISSHP, ISTP, AHCI, SSCI, SCI), Scopus, SciELO Chile.

Colaboración Institucional



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Autores - Afiliación



Ord. Autor Género Institución - País
1 Salvetti, Anna Mujer CNRS - Francia
Ecole Normale Super Lyon - Francia
Univ Lyon - Francia
Centre International de Recherche en Infectiologie - Francia
Ecole Normale Supérieure de Lyon - Francia
Université de Lyon - Francia
2 Coute, Yohann - Univ Grenoble Alpes - Francia
CEA - Francia
INSERM - Francia
Universite Grenoble Alpes - Francia
CEA Grenoble - Francia
3 Epstein, Alberto Hombre CNRS - Francia
Ecole Normale Super Lyon - Francia
Univ Lyon - Francia
Centre International de Recherche en Infectiologie - Francia
Ecole Normale Supérieure de Lyon - Francia
Université de Lyon - Francia
4 Arata, Loredana Mujer Publ Hlth Inst Chile - Chile
Instituto de Salud Pública de Chile - Chile
5 Kraut, Alexandra Mujer Univ Grenoble Alpes - Francia
CEA - Francia
INSERM - Francia
Universite Grenoble Alpes - Francia
CEA Grenoble - Francia
6 Navratil, Vincent Hombre UNIV LYON 1 - Francia
Université Claude Bernard Lyon 1 - Francia
7 Bouvet, Philippe Hombre Ecole Normale Super Lyon - Francia
CNRS - Francia
Ecole Normale Supérieure de Lyon - Francia
Centre de recherche en cancérologie de Lyon - Francia
8 Greco, Anna Mujer CNRS - Francia
Ecole Normale Super Lyon - Francia
Centre International de Recherche en Infectiologie - Francia
Ecole Normale Supérieure de Lyon - Francia

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Financiamiento



Fuente
Institut National de la Sante et de la Recherche Medicale (INSERM)
Centre National de la Recherche Scientifique (CNRS)
FINOVI Foundation
Universite Claude Bernard Lyon-1 (UCBL-1)
Agence Nationale pour la Recherche (ProFi grant)
Ecole Normale Superieure de Lyon (ENSL)

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Agradecimientos



Agradecimiento
The authors acknowledge the contribution of the PLATIM (PLAteau Technique d'Imagerie et de Microscopie, UMS3444, Lyon, FRANCE) and qPCR teams of SFR Bio-Sciences Gerland-Lyon Sud (UMS3444/US8) for their help as well as Heloise Amaro and Laetitia Hautier for technical assistance. This work was supported by Institut National de la Sante et de la Recherche Medicale (INSERM), Centre National de la Recherche Scientifique (CNRS), Ecole Normale Superieure de Lyon (ENSL), Universite Claude Bernard Lyon-1 (UCBL-1), by a grant from FINOVI Foundation to A.G., and by the Agence Nationale pour la Recherche (ProFi grant ANR-10-INBS-08-01). The authors declare no conflicts of interest associated with the contents of the manuscript. A.G., A.S., and Y.C. are members of INSERM.

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