] We study uniaxially strained graphene under the influence of non-uniform magnetic fields perpendicular to the material sample with a coordinate independent strain tensor. For that purpose, we solve the Dirac equation with anisotropic Fermi velocity and explore the conditions upon which such an equation possesses a supersymmetric structure in the quantum mechanical sense through examples. Working in a Laudau-like gauge, wave functions and energy eigenvalues are found analytically in terms of the magnetic field intensity, the anisotropy scales and other relevant parameters that shape the magnetic field profiles.