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<i>Geothrix oryzisoli</i> sp. nov., a ferric iron-reducing bacterium isolated from paddy soil
Indexado
WoS WOS:000946630100001
Scopus SCOPUS_ID:85149764510
DOI 10.1007/S10482-023-01817-0
Año 2023
Tipo artículo de investigación

Citas Totales

Autores Afiliación Chile

Instituciones Chile

% Participación
Internacional

Autores
Afiliación Extranjera

Instituciones
Extranjeras


Abstract



An anaerobic, Gram-staining-negative, rod-shaped, Fe(III)-reducing strain, designated SG189(T), was isolated from paddy soil in Fujian Province, China. Growth occurred at 20-35 celcius (optimum 30 celcius), pH 6.5-8.0 (optimum 7.0) and 0-0.2% (w/v) NaCl (optimum 0%). The strain SG189(T) showed the highest 16S rRNA sequences similarities to the type strains of Geothrix fermentans DSM 14018(T) (98.9%), "Geothrix terrae" SG184(T) (99.0%) and "Geothrix alkalitolerans" SG263(T) (99.3%). ANI and dDDH values between strain SG189(T) and the most closely related Geothrix species were 86.5-87.1% and 31.5-32.9%, which lower than the cut-off values (ANI 95-96% and dDDH 70%) for prokaryotic species delineation. Further, genome-based phylogenomic trees constructed using 81 core genes (UBCG2) and 120 conserved genes (GTDB) showed that strain SG189(T) formed a clade with members of the genus Geothrix. The menaquinone was shown to be MK-8, and the major fatty acids were iso-C-15:0 and iso-C-13:0 3OH. The genomic DNA G + C content was 68.2%. Additionally, we found that strain SG189(T) possessed ability to reduce ferric iron, and strain SG189(T) could reduce 10 mM of ferric citrate in 10 days with lactate as the sole electron donor. Based on the observed physiological and biochemical properties, chemotaxonomic characteristics, ANI and dDDH values, SG189(T) represents a novel species of the genus Geothrix, for which the name Geothrix oryzisoli sp. nov. is proposed. The type strain is SG189(T) (= GDMCC 1.3408(T) = JCM 39324(T)).

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Disciplinas de Investigación



WOS
Microbiology
Scopus
Sin Disciplinas
SciELO
Sin Disciplinas

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Publicaciones WoS (Ediciones: ISSHP, ISTP, AHCI, SSCI, SCI), Scopus, SciELO Chile.

Colaboración Institucional



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Autores - Afiliación



Ord. Autor Género Institución - País
1 Han, Shuang - Fujian Agr & Forestry Univ - China
Fujian Agriculture and Forestry University - China
2 Tang, Rong - Fujian Agr & Forestry Univ - China
Fujian Agriculture and Forestry University - China
3 Yang, Shang - Fujian Agr & Forestry Univ - China
Fujian Agriculture and Forestry University - China
4 Xie, Cheng Jie - Fujian Agr & Forestry Univ - China
Fujian Agriculture and Forestry University - China
5 Rao, Manik Prabhu Narsing - Universidad Autónoma de Chile - Chile
6 Rensing, Christopher Hombre Fujian Agr & Forestry Univ - China
Fujian Agriculture and Forestry University - China
7 Liu, Guo Hong - Fujian Acad Agr Sci - China
Fujian Academy of Agricultural Sciences - China
8 Zhou, Shun Gui - Fujian Agr & Forestry Univ - China
Fujian Agriculture and Forestry University - China

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Financiamiento



Fuente
National Natural Science Foundation of China
Natural Science Foundation of Fujian Province

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Agradecimientos



Agradecimiento
This work was supported by the National Natural Science Foundation of China (Grant: 41925028 and U21A20295) and Natural Science Foundation of Fujian Province (Grant: 2020J02015).

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