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Exploring the Genetic Consequences of Clonality in Haplodiplontic Taxa
Indexado
WoS WOS:000648961300009
Scopus SCOPUS_ID:85102964437
DOI 10.1093/JHERED/ESAA063
Año 2021
Tipo artículo de investigación

Citas Totales

Autores Afiliación Chile

Instituciones Chile

% Participación
Internacional

Autores
Afiliación Extranjera

Instituciones
Extranjeras


Abstract



Partially clonality is an incredibly common reproductive mode found across all the major eukaryotic lineages. Yet, population genetic theory is based on exclusive sexuality or exclusive asexuality, and partial clonality is often ignored. This is particularly true in haplodiplontic eukaryotes, including algae, ferns, mosses, and fungi, where somatic development occurs in both the haploid and diploid stages. Haplodiplontic life cycles are predicted to be correlated with asexuality, but tests of this prediction are rare. Moreover, there are unique consequences of having long-lived haploid and diploid stages in the same life cycle. For example, clonal processes uncouple the life cycle such that the repetition of the diploid stage via clonality leads to the loss of the haploid stage. Here, we surveyed the literature to find studies that had genotyped both haploid and diploid stages and recalculated population genetic summary metrics for seven red algae, one green alga, three brown algae, and three mosses. We compared these data to recent simulations that explicitly addressed the population genetic consequences of partial clonality in haplodiplontic life cycles. Not only was partial clonality found to act as a homogenizing force, but the combined effects of proportion of haploids, rate of clonality, and the relative strength of mutation versus genetic drift impacts the distributions of population genetic indices. We found remarkably similar patterns across commonly used population genetic metrics between our empirical and recent theoretical expectations. To facilitate future studies, we provide some recommendations for sampling and analyzing population genetic parameters for haplodiplontic taxa.

Revista



Revista ISSN
Journal Of Heredity 0022-1503

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Disciplinas de Investigación



WOS
Genetics & Heredity
Evolutionary Biology
Scopus
Sin Disciplinas
SciELO
Sin Disciplinas

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Publicaciones WoS (Ediciones: ISSHP, ISTP, AHCI, SSCI, SCI), Scopus, SciELO Chile.

Colaboración Institucional



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Autores - Afiliación



Ord. Autor Género Institución - País
1 Krueger-Hadfield, Stacy A. Mujer Univ Alabama Birmingham - Estados Unidos
The University of Alabama at Birmingham - Estados Unidos
2 Guillemin, Marie-Laure Mujer Universidad Austral de Chile - Francia
Universidad Austral de Chile - Chile
Biologie Evolutive et Ecologie des Algues - Francia
Sorbonne Université - Francia
3 Destombe, Christophe Hombre Universidad Austral de Chile - Francia
Biologie Evolutive et Ecologie des Algues - Francia
Sorbonne Université - Francia
4 Valero, M. Mujer Universidad Austral de Chile - Francia
Biologie Evolutive et Ecologie des Algues - Francia
Sorbonne Université - Francia
5 Stoeckel, Solenn - Univ Rennes - Francia
Institut de Genetique, Environnement et Protection des Plantes - Francia
INRAE - Francia
Université de Rennes - Francia

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Financiamiento



Fuente
French National Research Agency
Agence Nationale de la Recherche
University of Alabama at Birmingham
University of Alabama
American Genetics Association

Muestra la fuente de financiamiento declarada en la publicación.

Agradecimientos



Agradecimiento
This work was supported by the French National Research Agency (project Clonix2D ANR-18-CE32-0001) and start-up funds from the University of Alabama at Birmingham.
This work was supported by the French National Research Agency (project Clonix2D ANR-18-CE32-0001) and start-up funds from the University of Alabama at Birmingham. We thank the following authors for providing raw data O. DeClerck, P. Sosa, A. Vanderpoorten, M. van der Velde, and H van der Strate; N. Silbiger for help with R Code for density plots; S. Arnaud-Haond for comments and discussions on this work. We thank the anonymous reviewers that provided feedback improving our manuscript. M. Orive and A. Baker, especially for their patience in light of the pandemic and the delays in finishing this article; the reviewers whose greatly improved the manuscript; and the American Genetics Association for inviting SAKH and SS as symposium speakers at the AGA Presidential Symposium Sex and asex: the genetics of complex life cycles where ideas for this study were initiated. We acknowledge K. Schoenrock for drawings of algae and mosses used in figures and K. Chan for adapting the life cycle figure.

Muestra la fuente de financiamiento declarada en la publicación.