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Exploring the adsorption properties of doped phosphorene for the uptake of DNA nucleobases
Indexado
WoS WOS:000636695200102
Scopus SCOPUS_ID:85098942505
DOI 10.1016/J.MOLLIQ.2020.115183
Año 2021
Tipo artículo de investigación

Citas Totales

Autores Afiliación Chile

Instituciones Chile

% Participación
Internacional

Autores
Afiliación Extranjera

Instituciones
Extranjeras


Abstract



In pursuit of novel nanodevices for the manipulation of DNA constituents, layered phosphorene materials have emerged as promising candidates due to their excellent uptake properties, biocompatibility, and in vivo biodegradability. Here, a density functional theory (DFT) study is performed to explore the uptake of Watson-Crick DNA nucleobases onto metal/metalloid phosphorene nanoflakes (MPhos, M=Al, Si, Ti, Cu), providing microscopic insights to understand the molecular structure, adsorption stability, intermolecular forces, and effects on the electronic properties of the formed complexes in solution. Structural/stability analyses show that DNA nucleobases form stable complexes with doped-phosphorene by coordinate covalent bonding (chemisorption) in a mainly stacked adsorption pattern. Solvation effects considerably decrease the adsorption stability onto SiPhos, but (Al, Ti. Cu)Phos nanoflakes show adsorption energies higher than similar to 1 eV, acting as excellent uptake platforms of DNA biomolecules in solution. Binding and energy decomposition analyses (AIM, IGM, ALMO-EDA) reveal that the intermolecular forces (adsorption mechanism) are mainly driven by attractive electrostatic interactions (41-55%) and complemented with a balanced interplay between charge transfer, polarization, and dispersion driving forces. DNA nucleobases also act as n-dopants, inducing charge doping of the MPhos adsorbents. The latter cause considerable variations in the electronic structure of TiPhos and CuPhos nanoflakes. implying potential uses in the sensing of DNA constituents. Furthermore, electron-density and electron delocalization indexes reveal that the aromatic character of nucleobases is not affected upon chemisorption. These results provide an atomistic perspective on the potential use of doped-phosphorene materials for future adsorption, analysis, sensing, and/or resembling technologies of DNA constituents in solution. (C) 2020 Elsevier B.V. All rights reserved.

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Disciplinas de Investigación



WOS
Chemistry, Physical
Physics, Atomic, Molecular & Chemical
Scopus
Sin Disciplinas
SciELO
Sin Disciplinas

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Publicaciones WoS (Ediciones: ISSHP, ISTP, AHCI, SSCI, SCI), Scopus, SciELO Chile.

Colaboración Institucional



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Autores - Afiliación



Ord. Autor Género Institución - País
1 CORTES-ARRIAGADA, DIEGO ANDRES Hombre Universidad Tecnológica Metropolitana - Chile
2 Cid-Mora, Francisca Mujer Universidad Tecnológica Metropolitana - Chile

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Financiamiento



Fuente
FONDEQUIP
CONICYT/FONDECYT
Fondo Nacional de Desarrollo Científico y Tecnológico
Comisión Nacional de Investigación Científica y Tecnológica
Universidad Tecnológica Metropolitana
NLHPC
CONICYT/FONDEQUIP
Fund of Scientific and Technological Equipment

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Agradecimientos



Agradecimiento
D.C-A thanks the financial support of the CONICYT/FONDECYT project #11170289 and the computational resources through the CONICYT/FONDEQUIP project EQM180180. Project supported by the Fund of Scientific and Technological Equipment, the year 2018, code L318-04, Universidad Tecnologica Metropolitana. Powered@NLHPC: This research was partially supported by the supercomputing infrastructure of the NLHPC (ECM-02).
D.C-A thanks the financial support of the CONICYT/FONDECYT project #11170289 and the computational resources through the CONICYT/FONDEQUIP project EQM180180. Project supported by the Fund of Scientific and Technological Equipment, the year 2018, code L318-04, Universidad Tecnológica Metropolitana. Powered@NLHPC: This research was partially supported by the supercomputing infrastructure of the NLHPC (ECM-02).

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