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| DOI | 10.1016/J.MARGEN.2020.100783 | ||||
| Año | 2020 | ||||
| Tipo | artículo de investigación |
Citas Totales
Autores Afiliación Chile
Instituciones Chile
% Participación
Internacional
Autores
Afiliación Extranjera
Instituciones
Extranjeras
The spiny lobster, Panulirus argus, is an ecologically relevant species in shallow water coral reefs and a target of the most lucrative fishery in the greater Caribbean region. This study reports, for the first time, the heart + hemolymph transcriptome of the Caribbean spiny lobster Panulirus argus assembled from short Illumina 150 bp PE raw reads. A total of 80,152,094 raw reads were assembled using the Oyster River Protocol pipeline. The assembly resulted in a total of 254,773 transcripts. Functional gene annotation was conducted using the software package ‘dammit’. Lastly, gene enrichment analyses were conducted using the Gene Ontology (GO) and KEGG pathway (Kaas) databases. This resource will be of utmost importance in future research aiming at exploring the effect of local and regional anthropogenic disturbances, as well as global climate change on the molecular physiology of this overexploited species.
| Ord. | Autor | Género | Institución - País |
|---|---|---|---|
| 1 | BAEZA-MIGUELES, JUAN ANTONIO | Hombre |
Clemson University - Estados Unidos
Smithsonian Marine Station - Estados Unidos Universidad Católica del Norte - Chile Clemson Univ - Estados Unidos Smithsonian Marine Stn Ft Pierce - Estados Unidos |
| 2 | MacManes, Matthew | Hombre |
University of New Hampshire Durham - Estados Unidos
Univ New Hampshire - Estados Unidos |
| Agradecimiento |
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| JAB thanks Dr. Vincent P. Richards for bioinformatics support during the development of this project. Many thanks to Timothy Cronin for improving the English language of this manuscript. This research did not receive any specific grant from funding agencies in the public, commercial, or not-for-profit sectors. The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper. |