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Considerations for Docking of Selective Angiotensin-Converting Enzyme Inhibitors
Indexado
WoS WOS:000515381800057
Scopus SCOPUS_ID:85077941711
DOI 10.3390/MOLECULES25020295
Año 2020
Tipo revisión

Citas Totales

Autores Afiliación Chile

Instituciones Chile

% Participación
Internacional

Autores
Afiliación Extranjera

Instituciones
Extranjeras


Abstract



The angiotensin-converting enzyme (ACE) is a two-domain dipeptidylcarboxypeptidase, which has a direct involvement in the control of blood pressure by performing the hydrolysis of angiotensin I to produce angiotensin II. At the same time, ACE hydrolyzes other substrates such as the vasodilator peptide bradykinin and the anti-inflammatory peptide N-acetyl-SDKP. In this sense, ACE inhibitors are bioactive substances with potential use as medicinal products for treatment or prevention of hypertension, heart failures, myocardial infarction, and other important diseases. This review examined the most recent literature reporting ACE inhibitors with the help of molecular modeling. The examples exposed here demonstrate that molecular modeling methods, including docking, molecular dynamics (MD) simulations, quantitative structure-activity relationship (QSAR), etc, are essential for a complete structural picture of the mode of action of ACE inhibitors, where molecular docking has a key role. Examples show that too many works identified ACE inhibitory activities of natural peptides and peptides obtained from hydrolysates. In addition, other works report non-peptide compounds extracted from natural sources and synthetic compounds. In all these cases, molecular docking was used to provide explanation of the chemical interactions between inhibitors and the ACE binding sites. For docking applications, most of the examples exposed here do not consider that: (i) ACE has two domains (nACE and cACE) with available X-ray structures, which are relevant for the design of selective inhibitors, and (ii) nACE and cACE binding sites have large dimensions, which leads to non-reliable solutions during docking calculations. In support of the solution of these problems, the structural information found in Protein Data Bank (PDB) was used to perform an interaction fingerprints (IFPs) analysis applied on both nACE and cACE domains. This analysis provides plots that identify the chemical interactions between ligands and both ACE binding sites, which can be used to guide docking experiments in the search of selective natural components or novel drugs. In addition, the use of hydrogen bond constraints in the S-2 and S-2 ' subsites of nACE and cACE are suggested to guarantee that docking solutions are reliable.

Revista



Revista ISSN
Molecules 1420-3049

Métricas Externas



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Disciplinas de Investigación



WOS
Chemistry, Multidisciplinary
Biochemistry & Molecular Biology
Chemistry, Organic
Scopus
Sin Disciplinas
SciELO
Sin Disciplinas

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Publicaciones WoS (Ediciones: ISSHP, ISTP, AHCI, SSCI, SCI), Scopus, SciELO Chile.

Colaboración Institucional



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Autores - Afiliación



Ord. Autor Género Institución - País
1 CABALLERO-RUIZ, JULIO MIGUEL Hombre Universidad de Talca - Chile

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Origen de Citas Identificadas



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Citas identificadas: Las citas provienen de documentos incluidos en la base de datos de DATACIENCIA

Citas Identificadas: 5.0 %
Citas No-identificadas: 95.0 %

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Citas identificadas: Las citas provienen de documentos incluidos en la base de datos de DATACIENCIA

Citas Identificadas: 5.0 %
Citas No-identificadas: 95.0 %

Financiamiento



Fuente
Fondo Nacional de Desarrollo Científico y Tecnológico (FONDECYT)
Fondo Nacional de Desarrollo Científico y Tecnológico
National Institutes of Health
Fondo Nacional de Desarrollo Científico y Tecnológico

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Agradecimientos



Agradecimiento
This research was funded by Fondo Nacional de Desarrollo Cientifico y Tecnologico (FONDECYT), grant number 1170718.
Funding: This research was funded by Fondo Nacional de Desarrollo Científico y Tecnológico (FONDECYT), grant number 1170718.

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