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| DOI | 10.1007/978-3-642-32909-8_19 | ||||
| Año | 2012 | ||||
| Tipo | proceedings paper |
Citas Totales
Autores Afiliación Chile
Instituciones Chile
% Participación
Internacional
Autores
Afiliación Extranjera
Instituciones
Extranjeras
DNA analysis by microarrays is a powerful tool that allows replication of the RNA of hundreds of thousands of genes at the same time, generating a large amount of data in multidimensional space that must be analyzed using informatics tools. Various clustering techniques have been applied to analyze the microarrays, but they do not offer a systematic form of analysis. This paper proposes the use of Zinovyev's Elastic Net in an iterative way to find patterns of up-regulated genes. The new method proposed has been evaluated with up-regulated genes of the Escherichia Coli k12 bacterium and is compared with the Self-Organizing Maps (SOM) technique frequently used in this kind of analysis. The results show that the proposed method finds 87% of the up-regulated genes, compared to 65% of genes found by the SOM. A comparative analysis of Receiver Operating Characteristic with SOM shows that the proposed method is 12% more effective.
| Ord. | Autor | Género | Institución - País |
|---|---|---|---|
| 1 | LEVANO-HUAMACCTO, MARCOS ANTONIO | Hombre |
Universidad Católica de Temuco - Chile
|
| 2 | MELLADO-GATICA, ALEJANDRO MAURICIO | Hombre |
Universidad Católica de Temuco - Chile
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| 3 | Jayne, C | - | |
| 4 | Yue, S | - | |
| 5 | Iliadis, L | - |